Protein Subcellular Localization Prediction for Gram-negative Bacteria (@
BII
)
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Introduction
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Prediction
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Examples
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Prediction
Enter or paste
Gram-negative bacteria protein sequences
in
FASTA format
below:
>P02418|SwissProt|Cytoplasmic|50S ribosomal protein L9 MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEAR RAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIA DAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE >P05082|SwissProt|Cytoplasmic|Adenylate kinase (ATP-AMP transphosphorylase) MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAK DIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAG INVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTG EELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTK PVAEVRADLEKILG >P06139|SwissProt|Cytoplasmic|60 kDa chaperonin (Protein Cpn60) (groEL protein) MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTIT KDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAII TEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTI SANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYL SPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLII AEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIR QQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVT RSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM >P06627|SwissProt|Cytoplasmic|TraY protein MKRFGTRSATGKMVKLKLPVDVESLLIEASNRSGRSRSFEAVIRLKDHLH RYPKFNRAGNIYGKSLVKYLTMRLDDETNQLLIAAKNRSGWCKTDEAADR VIDHLIKFPDFYNSEIFREADKEEDITFNTL >P07364|SwissProt|Cytoplasmic|Chemotaxis protein methyltransferase MTSSLPCGQTSLLLQMTERLALSDAHFRRISQLIYQRAGIVLADHKRDMV YNRLVRRLRSLGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREA HHFPLLADHARRRSGEYRVWSAAASTGEEPYSIAMTLADTLGTAPGRWKV FASDIDTEVLEKARSGIYRHEELKNLTPQQLQRYFMRGTGPHEGLVRVRQ ELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMIYFDQTTQQEILRRFVP LLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD >15645712|Genbank|Extracellular|conserved hypothetical secreted protein MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKK YFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGC HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKAC DLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAM QYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV >P37060|SwissProt|Extracellular|Sialidase precursor (EC 3.2.1.18) (Neuraminidase) (NANase) MRFKNVKKTALMLAMFGMATSSNAALFDYNATGDTEFDSPAKQGWMQDNT NNGSGVLTNADGMPAWLVQGIGGRAQWTYSLSTNQHAQASSFGWRMTTEM KVLSGGMITNYYANGTQRVLPIISLDSSGNLVVEFEGQTGRTVLATGTAA TEYHKFELVFLPGSNPSASFYFDGKLIRDNIQPTASKQNMIVWGNGSSNT DGVAAYRDIKFEIQGDVIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGD PGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPS SNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIDVTD QVKERSFQIAGWGGSELYRRNTSLNSQQDWQSNAKIRIVDGAANQIQVAD GSRKYVVTLSIDESGGLVANLNGVSAPIILQSEHAKVHSFHDYELQYSAL NHTTTLFVDGQQITTWAGEVSQENNIQFGNADAQIDGRLHVQKIVLTQQG HNLVEFDAFYLAQQTPEVEKDLEKLGWTKIKTGNTMSLYGNASVNPGPGH GITLTRQQNISGSQNGRLIYPAIVLDRFFLNVMSIYSDDGGSNWQTGSTL PIPFRWKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPR QQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFT NPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQLVNGASAYSDIYQLDSEN AIVIVETDNSNMRILRMPITLLKQKLTLSQN >P14498|SwissProt|Inner membrane integral membrane protein|TraS protein MKRSDLEKDAAYILDKFKQLDYEIPSNRQILKVIFYKLVVVYVFQLLFII FDIFINSNVRDYHYFDTFVITLGSNAFFSLVFLMSTYNLVSLKISLGSEI TEQSVLLKLVERKINSYGQFLMVVNAIVGCVLLSSGERFVAGLGFSWFVT YLISMITLQTSLSRYMTPAVVSSLSKVKELLSASPK >P23199|SwissProt|Inner membrane integral membrane protein|Galactoside transport ATP-binding protein mglA MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHALMGENGA GKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLV LQRSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTL SVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGC GIVYISHKMEEIFQLCDEVTVLRDGQWIATEPLAGLTMDKIIAMMVGRSL NQRFPDKENKPGEVILEVRNLTSLRQPSIRDVSFDLHKGEILGIAGLVGA KRTDIVETLFGIREKSAGTITLHGKQINNHNANEAINHGFALVTEERRST GIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGH RTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILR LASLHL >1279830|Genbank|Outer membrane integral membrane protein|OmpK17 MNKIARLSALAVVLAASVGTTAFAATSTVTGGYAQSDMQGKANKAGGFNL KYRYEQDNNPLGVIGSFTYTEKDNNSNGTYNKGQYYGITAGPAYRLNDWA SIYGVVGVGYGKFQNNNYPHKSDMSDYGFSYGAGLQFNPIENVALDFSYE QSRIRNVDVGTWIAGVGYRF >15596485|Genbank|Outer membrane integral membrane protein|probable outer membrane protein MKTIWFKTSLALTISAVSTYTLANGIAINEQSASGAGTAYAGRASSALDA STIYGNPAGLSKLKRTEVSGGLAIVKAKDDISQAHSTAQGSNKGDSVPLA AVPFGYFSTPINEDFTFGLGIYVPYGIINDYENGFMGSSHGSYSKVQVIT VQPTIAWKINDKVSVGFGPTFNRIDGQLKNTLATNGLLGSNGDTKINIKG DDTAIGYNVGVMVDLTDDTTWGLTYHSKVKYHLGGNTEVKNAPGALGLNG KYDAKLDITLPESVDTSITHKFDDKWTGYLGAVWTRWSRLEKIEVRNSGV PALGQALGFNTIGEDLNWRDTWSFSVGTSYQATPEWVLRTGFAYEPSPTS NEDRNVRIPVGDRKVFTVGAGWSPNQDLTVDVAYAYLWETTAGVNQEGSA LQPAYSAKYDNSAHGLTAQVTYRF >15600167|Genbank|Outer membrane integral membrane protein|probable secretion protein MLRRLSLAAAVAAATGVAWAAQPTPLPTKTDLISVYKEAVDNNADLAAAQ ADYLARKEVVPQARAGLLPQLGAGARVGDTRIAFDERPATVKRNSQVVQA TLSQPLFRADRWFQWQAAKETSDQARLEFSATQQDLILRSAETYFTVLRA QDNLATSKAEEAAFKRQLDQANERFDVGLSDKTDVLEAQASYDTARANRL IAEQRVDDAFQALVTLTNRDYSAIEGMRHTLPVVPPAPNDAKAWVDTAVQ QNLRLLASNYAVNAAEETLRQRKAGHLPTLDAVAQYQKGDNDALGFANSA ANPLVHYGKYVDERSIGLELNIPIYSGGLTSSQVRESYQRLNQSEQSREG QRRQVVQDTRNLHRAVNTDVEQVQARRQAIISNQSSLEATEIGYQVGTRN IVDVLNAQRQLYAAVRDYNNSRYDYILDTLRLKQAAGTLSPADLEALSAY LKQDYDPDKDFLPPDLAKAAAEQLQSKPRQQY >11128402|Genbank|Periplasmic|TctC MKKQLLRTLTASILLMSTSVLAQEAPSRTECIAPAKPGGGFDLTCKLIQV SLLETGAIEKPMRVTYMPGGVGAVAYNAIVAQRPGEPGTVVAFSGGSLLN LSQGKFGRYGVDDVRWLASVGTDYGMIAVRADSPWKTLKDLMTAMEKDPN SVVIGAGASIGSQDWMKSALLAQKANVDPHKMRYVAFEGGGEPVTALMGN HVQVVSGDLSEMVPYLGGDKIRVLAVFSENRLPGQLANIPTAKEQGYDLV WPIIRGFYVGPKVSDADYQWWVDTFKKLQQTDEFKKQRDLRGLFEFDMTG QQLDDYVKKQVTDYREQAKAFGLAK >P06997|SwissProt|Periplasmic|Sulfate-binding protein precursor SBP (Sulfate starvation-induced protein 2) (SSI2) MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFSAHWKQQ TGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKE WIKRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSG GARWNYLAAWGYALHHNNNDQAKAQDFVRALYKNEEVLDSGARGSTNTFV ERGIGDVLIAWENEALLAANELGKDKFEIVTPSESILAEPTVSVVDKVVE KKGTKEVAEAYLKYLYSPEGQEIAAKNYYRPRDAEVAKKYENAFPKLKLF TIDEEFGGWTKAQKEHFANGGTFDQISKR >P07102|SwissProt|Periplasmic|Periplasmic appA protein precursor MKAILIPFLSLLIPLTPQSAFAQSEPELKLESVVIVSRHGVRAPTKATQL MQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRLVADGLLAKKGCP QSGQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPL KTGVCQLDNANVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLC LKREKQDESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQG MPEPGWGRITDSHQWNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTA LTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGGALELNWTLPGQPDNTP PGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNTPPGEVKLT LAGCEERNAQGMCSLAGFTQIVNEARIPACSL >P02919|SwissProt|Cytoplasmic/InnerMembrane|Penicillin-binding protein 1B (PBP-1b) (PBP1b) (Murein polymerase) [Includes: Penicillin-insensitive transglycosylase (EC 2.4.1.129) (Peptidoglycan glycosyltransferase) (Peptidoglycan TGase); Penicillin- sensitive transpeptidase (EC 3.4.-.-) (DD-transpeptidase)] MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEEPMPRKG KGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVW QLAAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQAN SIEMIRRPFDFPDSKEGQVRARLTFDGDHLATIVNMENNRQFGFFRLDPR LITMISSPNGEQRLFVPRSGFPDLLVDTLLATEDRHFYEHDGISLYSIGR AVLANLTAGRTVQGASTLTQQLVKNLFLSSERSYWRKANEAYMALIMDAR YSKDRILELYMNEVYLGQSGDNEIRGFPLASLYYFGRPVEELSLDQQALL VGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYDMLSARPLG VQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNR AMQARRSIGSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGQVWSP QNDDRRYSESGRVMLVDALTRSMNVPTVNLGMALGLPAVTETWIKLGVPK DQLHPVPAMLLGALNLTPIEVAQAFQTIASGGNRAPLSALRSVIAEDGKV LYQSFPQAERAVPAQAAYLTLWTMQQVVQRGTGRQLGAKYPNLHLAGKTG TTNNNVDTWFAGIDGSTVTITWVGRDNNQPTKLYGASGAMSIYQRYLANQ TPTPLNLVPPEDIADMGVDYDGNFVCSGGMRILPVWTSDPQSLCQQSEMQ QQPSGNPFDQSSQPQQQPQQQPAQQEQKDSDGVAGWIKDMFGSN >P17443|SwissProt|Cytoplasmic/InnerMembrane|UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) SGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP KHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLG MGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGA FPNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTM PQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY AWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAA KIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSR VARA >P14013|SwissProt|Extracellular/Periplasmic/Outer membrane lipoprotein|Outer surface protein A precursor MKKYLLGIGLILALIACKQNVSSLDEKNSVSVDLPGEMNVLVSKEKNKDG KYDLIATVDKLELKGTSDKNNGSGVLEGVKADKSKVKLTISDDLGQTTLE VFKEDGKTLVSKKVTSKDKSSTEEKFNEKGEVSEKIITRADGTRLEYTEI KSDGSGKAKEVLKSYVLEGTLTAEKTTLVVKEGTVTLSKNISKSGEVSVE LNDTDSSAATKKTAAWNSGTSTLTITVNSKKTKDLVFTKENTITVQQYDS NGTKLEGSAVEITKLDEIKNALK
(Note: Only the first 100 sequences will be predicted if the number of above entered or pasted sequences is more than 100.)
Or
Upload the Gram-negative bacteria protein sequence file in
FASTA format
below:
(Note: Only the first 100 sequences will be processed if the uploaded file contains more than 100 sequences.)